Copy the code below and paste it to your HTML page
Note:
If you would like to use Quick Jump across multiple ontologies:
You can enter a comma-separated list of ontology ids:
var BP_ontology_id = "NCIt,SNOMEDCT";
You can set the variable to 'all' to search all ontologies in SIFR BioPortal:
var BP_ontology_id = "all";
To include definitions in the Jump To drop-down, add the following variable in Javascript:
var BP_include_definitions = true;
In the code that you just pasted, make sure to change the path to the quick_jump.js file to point to the location where you put the file (relative to your HTML file)
For example, if you put the quick_jump.js file in the same directory as your HTML file, this is the code you would use:
In the header for the page where you want the form field, include the
form_complete.js
file.
On your form, for the fields where you want to use the class-selection widget, specify the field's class in the following format:
bp_form_complete-{ontology_id_list}-{value}
For example,
bp_form_complete-NCIT-uri
will use NCI Thesaurus (ontology id is NCIT) and will put the class URI in the field after the user selects the class from the pull-down list.
Note:
In addition to single ontology ids, you can use a list:
bp_form_complete-NCIT,NCBITAXON-uri
OR
use 'all' to search across all SIFR BioPortal ontologies:
bp_form_complete-all-uri
The autocomplete widget accesses ontology content from the latest version of the ontology.
You can use the following parameters to select which value will be placed into the user-visible input field:
shortid
put the short id of the class, as used in SIFR BioPortal (e.g., "Common_Neoplasm");
name
put the preferred name of the class (e.g., "Common Neoplasm");
In addition to the input element you defined, there are four hidden form elements that are created and then set when a user selects a class from the list. For example, if you create a field with this code: